Abstracts

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A. Maria Masci, McCall, S., Racioppi, A., Ellis, H. Judge, Obeid, J. S., Smith, B., Stoeckert, C., and Zheng, J., ICBO_2018_10: Standardization of the Histopathology Cancer Report: An Ontological Approach, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
D. Trigkakis, Preece, J., Meier, A., Elser, J., Kvilekval, K., Fedorov, D., Manjunath, B. S., Jaiswal, P., and Todorovic, S., ICBO_2018_11: Planteome & BisQue: Automating Image Annotation with Ontologies using Deep-Learning Networks, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
C. Stoeckert, Birtwell, D., Freedman, H., Miller, M., and Williams, H., ICBO_2018_12: Transforming and Unifying Research with Biomedical Ontologies: The Penn TURBO project, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
A. Barton, Grenier, O., and Ethier, J. - F., ICBO_2018_13: The Identity and Mereology of Pathological Dispositions, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
M. Clarkson and Whipple, M., ICBO_2018_14: Does the Foundational Model of Anatomy ontology provide a knowledgebase for learning and assessment in anatomy education?, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
M. Halper, Ochs, C., Perl, Y., Arabandi, S., and Musen, M., ICBO_2018_15: Quality Assurance of Ontology Content Reuse, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
C. Mejía and Collado-Vides, J., ICBO_2018_16: A falsification approach to create and check ontology definitions, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
P. Manda, Beasley, L., and Mohanty, S., ICBO_2018_18: Taking a Dive: Experiments in Deep Learning for Automatic Ontology-based Annotation of Scientific Literature, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
R. Tauber, Munro, J. B., Nadendla, S., Chunara, B., Chibucos, M. C., and Giglio, M., ICBO_2018_19: Current Development in the Evidence and Conclusion Ontology (ECO), in International Conference on Biomedical Ontology (ICBO 2018), 2018.
S. Laulederkind, G. Hayman, T., Wang, S. - J., Bolton, E., Smith, J. R., Tutaj, M., de Pons, J., Shimoyama, M., and Dwinell, M., ICBO_2018_2: Adapting Disease Vocabularies for Curation at the Rat Genome Database, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
H. Küçük-Mcginty, Schurer, S., and Visser, U., ICBO_2018_20: KNowledge Acquisition and Representation Methodology (KNARM), in International Conference on Biomedical Ontology (ICBO 2018), 2018.
D. Stevenson and Zumajo, C., ICBO_2018_21: From PO to GO and back, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
N. Matentzoglu and Osumi-Sutherland, D., ICBO_2018_22: Reconciling ontology definitions using the Ontology Pattern Reconciliation Workbench and the DOSDP framework, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
M. Horridge, Gonçalves, R. S., Nyulas, C. I., Tudorache, T., and Musen, M., ICBO_2018_23: Protégé 5.5 – Improvements for Editing Biomedical Ontologies, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
E. Ong, He, Y., and Zheng, J., ICBO_2018_24: eXtensible ontology development (XOD) using web-based Ontoanimal tools, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
A. Meier, Laporte, M. - A., Elser, J., Cooper, L., Preece, J., Jaiswal, P., and Poelen, J., ICBO_2018_25: OOPS: The Ontology of Plant Stress, A semi-automated standardization methodology, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
J. Leonardo Mejino, Detwiler, L., Cox, T., Cunningham, M., and Brinkley, J., ICBO_2018_26: Multi-species Malformation Ontologies, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
R. Scheuermann, Aevermann, B., and Keshk, M., ICBO_2018_27: Semantic Interoperability: Challenges and Opportunities in Cell Type Knowledge Representation, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
Y. He, Steck, B., Ong, E., Mariani, L., Lienczewski, C., Balis, U., Kretzler, M., Himmelfarb, J., Bertram, J. F., Azeloglu, E., Iyengar, R., Hoshizaki, D., and Mooney, S. D., ICBO_2018_28: KTAO: A kidney tissue atlas ontology to support community-based kidney knowledge base development and data integration, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
R. Lee, Chan, J., Grove, C., and Sternberg, P., ICBO_2018_29: Graph Summary of Ontology-based Annotations, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
B. Farrell and Bengtson, J., ICBO_2018_3: Ontology based data architecture to promote data sharing in electrophysiology, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
ICBO_2018_30: An Expertise Ontology for Cooperative Extension, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
K. Schekotihin, Rodler, P., Schmid, W., Horridge, M., and Tudorache, T., ICBO_2018_31: Test-driven Ontology Development in Protégé, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
H. Küçük-Mcginty, Clark, A., Graybeal, J., Cooper, D., Turner, J., Dorf, M., Musen, M., Bunin, B., and Schurer, S., ICBO_2018_32: Ontolobridge – A Semi-Automated Ontology Update Request System for Better FAIR-ifying BioAssay Ontology, Drug Target Ontology, and LINCS Ontology, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
H. Liu, Zheng, L., Perl, Y., Geller, J., and Elhanan, G., ICBO_2018_35: Can a Convolutional Neural Network Support Auditing of NCI Thesaurus Neoplasm Concepts?, in International Conference on Biomedical Ontology (ICBO 2018), 2018.

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