Abstracts

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Conference Paper
K. - L. Ma, “ICBO_2018_77: Big Data Visualization”, in International Conference on Biomedical Ontology (ICBO 2018), Corvallis, OR, 2008.
M. Haendel, Vasilevsky, N., Rageth, K., Koehler, S., Robinson, P., McMurry, J., Shefchek, K., Brownstein, C., Holm, I., and Mungall, C., “ICBO_2018_69: An (ontological) patient perspectiv”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
M. Haendel, Vasilevsky, N., Rageth, K., Koehler, S., Robinson, P., McMurry, J., Shefchek, K., Brownstein, C., Holm, I., and Mungall, C., “ICBO_2018_69: An (ontological) patient perspectiv”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
K. Mnika, Group, S. Cell Disea, Vasilevsky, N., Wonkam, A., and Mulder, N., “ICBO_2018_65: An ontology-driven data capture and catalogue framework for the development of research and clinical databases in Sickle Cell Disease”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
K. Mnika, Group, S. Cell Disea, Vasilevsky, N., Wonkam, A., and Mulder, N., “ICBO_2018_65: An ontology-driven data capture and catalogue framework for the development of research and clinical databases in Sickle Cell Disease”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
G. Mazandu, Group, S. Cell Disea, Vasilevsky, N., Wonkam, A., and Mulder, N., “ICBO_2018_64: Development and implementation of the Sickle Cell Disease Ontology”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
G. Mazandu, Group, S. Cell Disea, Vasilevsky, N., Wonkam, A., and Mulder, N., “ICBO_2018_64: Development and implementation of the Sickle Cell Disease Ontology”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
P. Mabee, Balhoff, J., Dahdul, W., Lapp, H., Mungall, C., and Vision, T., “ICBO_2018_62: Reasoning over anatomical homology in the Phenoscape KB”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
P. Mabee, Balhoff, J., Dahdul, W., Lapp, H., Mungall, C., and Vision, T., “ICBO_2018_62: Reasoning over anatomical homology in the Phenoscape KB”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
W. Duncan, Thyvalikakath, T., Siddiqui, Z., LaPradd, M., Wen, C., Zheng, J., Roberts, A., Hood, D., Schleyer, T., Manimangalam, A., Rindal, D., Jurkovich, M., Shea, T., Bogacz, D., Yu, T., Fellows, J., Gordan, V., and Gilbert, G., “ICBO_2018_61: Using the Oral Health and Disease Ontology to Study Dental Outcomes in National Dental PBRN Practices”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
W. Duncan, Whalen, P., Muralidharan, A., and Kiddy, J., “ICBO_2018_60: Enhancing Semantic Analysis of Pathology Reports”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
N. J. Otte, Stansbury, C., Vajda, J., Manion, F., Umberfield, E., He, Y., Harris, M., Obeid, J., Brochhausen, M., Duncan, W., and Tao, C., “ICBO_2018_59: Coordinated Evolution of Ontologies of Informed Consent”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
K. - L. Ma, “ICBO_2018_55: Visualization: A Powerful Tool for Data Exploration and Storytelling”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
P. Fernando, Zeng, E., and Mabee, P., “ICBO_2018_52: The integrative use of anatomy ontology and protein-protein interaction networks to study evolutionary phenotypic transitions”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
M. Massoud, “ICBO_2018_48: Evidence-based medicine,Knowledge Modeling Framework”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
P. Manda and Vision, T., “ICBO_2018_47: On the statistical sensitivity of semantic similarity metrics”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
R. Tauber, Balhoff, J., Douglass, E., Mungall, C., and Overton, J. A., “ICBO_2018_46: Standardizing Ontology Workflows Using ROBOT”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
L. Beasley and Manda, P., “ICBO_2018_4: Comparison of Natural Language Processing Tools for Automatic Gene Ontology Annotation of Scientific Literature”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
D. Dinakarpandian, Dinakar, B., Liedtke, M., and Musen, M., “ICBO_2018_39: TOCSOC: A temporal ontology for comparing the survival outcomes of clinical trials in oncology”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
H. Küçük-Mcginty, Clark, A., Graybeal, J., Cooper, D., Turner, J., Dorf, M., Musen, M., Bunin, B., and Schurer, S., “ICBO_2018_32: Ontolobridge – A Semi-Automated Ontology Update Request System for Better FAIR-ifying BioAssay Ontology, Drug Target Ontology, and LINCS Ontology”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
Y. He, Steck, B., Ong, E., Mariani, L., Lienczewski, C., Balis, U., Kretzler, M., Himmelfarb, J., Bertram, J. F., Azeloglu, E., Iyengar, R., Hoshizaki, D., and Mooney, S. D., “ICBO_2018_28: KTAO: A kidney tissue atlas ontology to support community-based kidney knowledge base development and data integration”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
Y. He, Steck, B., Ong, E., Mariani, L., Lienczewski, C., Balis, U., Kretzler, M., Himmelfarb, J., Bertram, J. F., Azeloglu, E., Iyengar, R., Hoshizaki, D., and Mooney, S. D., “ICBO_2018_28: KTAO: A kidney tissue atlas ontology to support community-based kidney knowledge base development and data integration”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
J. Leonardo Mejino, Detwiler, L., Cox, T., Cunningham, M., and Brinkley, J., “ICBO_2018_26: Multi-species Malformation Ontologies”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
A. Meier, Laporte, M. - A., Elser, J., Cooper, L., Preece, J., Jaiswal, P., and Poelen, J., “ICBO_2018_25: OOPS: The Ontology of Plant Stress, A semi-automated standardization methodology”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
M. Horridge, Gonçalves, R. S., Nyulas, C. I., Tudorache, T., and Musen, M., “ICBO_2018_23: Protégé 5.5 – Improvements for Editing Biomedical Ontologies”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.

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