Abstracts

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Conference Paper
C. Stoeckert, Birtwell, D., Freedman, H., Miller, M., and Williams, H., “ICBO_2018_12: Transforming and Unifying Research with Biomedical Ontologies: The Penn TURBO project”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
M. Clarkson and Whipple, M., “ICBO_2018_14: Does the Foundational Model of Anatomy ontology provide a knowledgebase for learning and assessment in anatomy education?”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
S. Laulederkind, G. Hayman, T., Wang, S. - J., Bolton, E., Smith, J. R., Tutaj, M., de Pons, J., Shimoyama, M., and Dwinell, M., “ICBO_2018_2: Adapting Disease Vocabularies for Curation at the Rat Genome Database”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
J. - P. Gourdine, Vasilevsky, N., Winfree, L., Brush, M., and Haendel, M., “ICBO_2018_38: Expanding the Molecular Glycophenotype Ontology to include model organisms and acquired diseases”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
D. Welter, Jupp, S., and Osumi-Sutherland, D., “ICBO_2018_40: Human Cell Atlas Ontology”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
T. Pells, Fisher, M., Segerdell, E., Fortriede, J., Burns, K., Chu, S., Chaturvedi, P., James-Zorn, C., Lotay, V., Nenni, M., Ponferrada, V. G., Wang, D. Zhou, Wang, Y., Karimi, K., Vize, P., and Zorn, A., “ICBO_2018_53: Visualization of gene expression and expression as a phenotype with the XPO, XAO and DO using a combination of experimental data sources”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
T. Pells, Fisher, M., Segerdell, E., Fortriede, J., Burns, K., Chu, S., Chaturvedi, P., James-Zorn, C., Lotay, V., Nenni, M., Ponferrada, V. G., Wang, D. Zhou, Wang, Y., Karimi, K., Vize, P., and Zorn, A., “ICBO_2018_53: Visualization of gene expression and expression as a phenotype with the XPO, XAO and DO using a combination of experimental data sources”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
W. Duncan, Whalen, P., Muralidharan, A., and Kiddy, J., “ICBO_2018_60: Enhancing Semantic Analysis of Pathology Reports”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
W. Duncan, Thyvalikakath, T., Siddiqui, Z., LaPradd, M., Wen, C., Zheng, J., Roberts, A., Hood, D., Schleyer, T., Manimangalam, A., Rindal, D., Jurkovich, M., Shea, T., Bogacz, D., Yu, T., Fellows, J., Gordan, V., and Gilbert, G., “ICBO_2018_61: Using the Oral Health and Disease Ontology to Study Dental Outcomes in National Dental PBRN Practices”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
K. Wimalanathan, Andorf, C., Friedberg, I., and Lawrence-Dill, C., “ICBO_2018_63: GO-MAP Implements CAFA Tools: Improved Automated Gene Function Annotation for Plants”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
G. Mazandu, Group, S. Cell Disea, Vasilevsky, N., Wonkam, A., and Mulder, N., “ICBO_2018_64: Development and implementation of the Sickle Cell Disease Ontology”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
K. Mnika, Group, S. Cell Disea, Vasilevsky, N., Wonkam, A., and Mulder, N., “ICBO_2018_65: An ontology-driven data capture and catalogue framework for the development of research and clinical databases in Sickle Cell Disease”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
D. LeBauer and Willis, C., “ICBO_2018_67: Vocabularies, Ontologies, APIs, and Formats for Heterogeneous High Throughput Crop Phenotyping Data”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
P. Gupta, Preece, J., Jaiswal, P., Tello-Ruiz, M. K., Wei, S., Naithani, S., Olson, A., Stein, J., Jiao, Y., Wang, B., Kumari, S., Lee, Y. Koung, and Kumar, V., “ICBO_2018_71: Comparative functional analysis in plants with Gramene”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
P. Gupta, Preece, J., Jaiswal, P., Tello-Ruiz, M. K., Wei, S., Naithani, S., Olson, A., Stein, J., Jiao, Y., Wang, B., Kumari, S., Lee, Y. Koung, and Kumar, V., “ICBO_2018_71: Comparative functional analysis in plants with Gramene”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.
A. Thessen, Buttigieg, P. Luigi, Walls, R., Verdolin, J., and Schulz, K., “ICBO_2018_75: ECOCORE: An ontology for core ecological concepts”, in International Conference on Biomedical Ontology (ICBO 2018), 2018.